RNN_FCNPlus

This is an unofficial PyTorch implementation by Ignacio Oguiza - oguiza@timeseriesAI.co

MGRU_FCNPlus


def MGRU_FCNPlus(
    args:VAR_POSITIONAL, se:int=16, kwargs:VAR_KEYWORD
):

A sequential container.

Modules will be added to it in the order they are passed in the constructor. Alternatively, an OrderedDict of modules can be passed in. The forward() method of [Sequential](https://timeseriesAI.github.io/tsai/models.tabfusiontransformer.html#sequential) accepts any input and forwards it to the first module it contains. It then “chains” outputs to inputs sequentially for each subsequent module, finally returning the output of the last module.

The value a [Sequential](https://timeseriesAI.github.io/tsai/models.tabfusiontransformer.html#sequential) provides over manually calling a sequence of modules is that it allows treating the whole container as a single module, such that performing a transformation on the [Sequential](https://timeseriesAI.github.io/tsai/models.tabfusiontransformer.html#sequential) applies to each of the modules it stores (which are each a registered submodule of the [Sequential](https://timeseriesAI.github.io/tsai/models.tabfusiontransformer.html#sequential)).

What’s the difference between a [Sequential](https://timeseriesAI.github.io/tsai/models.tabfusiontransformer.html#sequential) and a :class:torch.nn.ModuleList? A ModuleList is exactly what it sounds like–a list for storing Module s! On the other hand, the layers in a [Sequential](https://timeseriesAI.github.io/tsai/models.tabfusiontransformer.html#sequential) are connected in a cascading way.

Example::

# Using Sequential to create a small model. When `model` is run,
# input will first be passed to `Conv2d(1,20,5)`. The output of
# `Conv2d(1,20,5)` will be used as the input to the first
# `ReLU`; the output of the first `ReLU` will become the input
# for `Conv2d(20,64,5)`. Finally, the output of
# `Conv2d(20,64,5)` will be used as input to the second `ReLU`
model = nn.Sequential(
    nn.Conv2d(1, 20, 5), nn.ReLU(), nn.Conv2d(20, 64, 5), nn.ReLU()
)

# Using Sequential with OrderedDict. This is functionally the
# same as the above code
model = nn.Sequential(
    OrderedDict(
        [
            ("conv1", nn.Conv2d(1, 20, 5)),
            ("relu1", nn.ReLU()),
            ("conv2", nn.Conv2d(20, 64, 5)),
            ("relu2", nn.ReLU()),
        ]
    )
)

source

MLSTM_FCNPlus


def MLSTM_FCNPlus(
    args:VAR_POSITIONAL, se:int=16, kwargs:VAR_KEYWORD
):

A sequential container.

Example::

# Using Sequential to create a small model. When `model` is run,
# input will first be passed to `Conv2d(1,20,5)`. The output of
# `Conv2d(1,20,5)` will be used as the input to the first
# `ReLU`; the output of the first `ReLU` will become the input
# for `Conv2d(20,64,5)`. Finally, the output of
# `Conv2d(20,64,5)` will be used as input to the second `ReLU`
model = nn.Sequential(
    nn.Conv2d(1, 20, 5), nn.ReLU(), nn.Conv2d(20, 64, 5), nn.ReLU()
)

# Using Sequential with OrderedDict. This is functionally the
# same as the above code
model = nn.Sequential(
    OrderedDict(
        [
            ("conv1", nn.Conv2d(1, 20, 5)),
            ("relu1", nn.ReLU()),
            ("conv2", nn.Conv2d(20, 64, 5)),
            ("relu2", nn.ReLU()),
        ]
    )
)

source

MRNN_FCNPlus


def MRNN_FCNPlus(
    args:VAR_POSITIONAL, se:int=16, kwargs:VAR_KEYWORD
):

A sequential container.

Example::

# Using Sequential to create a small model. When `model` is run,
# input will first be passed to `Conv2d(1,20,5)`. The output of
# `Conv2d(1,20,5)` will be used as the input to the first
# `ReLU`; the output of the first `ReLU` will become the input
# for `Conv2d(20,64,5)`. Finally, the output of
# `Conv2d(20,64,5)` will be used as input to the second `ReLU`
model = nn.Sequential(
    nn.Conv2d(1, 20, 5), nn.ReLU(), nn.Conv2d(20, 64, 5), nn.ReLU()
)

# Using Sequential with OrderedDict. This is functionally the
# same as the above code
model = nn.Sequential(
    OrderedDict(
        [
            ("conv1", nn.Conv2d(1, 20, 5)),
            ("relu1", nn.ReLU()),
            ("conv2", nn.Conv2d(20, 64, 5)),
            ("relu2", nn.ReLU()),
        ]
    )
)

source

GRU_FCNPlus


def GRU_FCNPlus(
    c_in, c_out, seq_len:NoneType=None, d:NoneType=None, hidden_size:int=100, rnn_layers:int=1, bias:bool=True,
    cell_dropout:int=0, rnn_dropout:float=0.8, bidirectional:bool=False, shuffle:bool=True, fc_dropout:float=0.0,
    use_bn:bool=False, conv_layers:list=[128, 256, 128], kss:list=[7, 5, 3], se:int=0, custom_head:NoneType=None
):

A sequential container.

Example::

# Using Sequential to create a small model. When `model` is run,
# input will first be passed to `Conv2d(1,20,5)`. The output of
# `Conv2d(1,20,5)` will be used as the input to the first
# `ReLU`; the output of the first `ReLU` will become the input
# for `Conv2d(20,64,5)`. Finally, the output of
# `Conv2d(20,64,5)` will be used as input to the second `ReLU`
model = nn.Sequential(
    nn.Conv2d(1, 20, 5), nn.ReLU(), nn.Conv2d(20, 64, 5), nn.ReLU()
)

# Using Sequential with OrderedDict. This is functionally the
# same as the above code
model = nn.Sequential(
    OrderedDict(
        [
            ("conv1", nn.Conv2d(1, 20, 5)),
            ("relu1", nn.ReLU()),
            ("conv2", nn.Conv2d(20, 64, 5)),
            ("relu2", nn.ReLU()),
        ]
    )
)

source

LSTM_FCNPlus


def LSTM_FCNPlus(
    c_in, c_out, seq_len:NoneType=None, d:NoneType=None, hidden_size:int=100, rnn_layers:int=1, bias:bool=True,
    cell_dropout:int=0, rnn_dropout:float=0.8, bidirectional:bool=False, shuffle:bool=True, fc_dropout:float=0.0,
    use_bn:bool=False, conv_layers:list=[128, 256, 128], kss:list=[7, 5, 3], se:int=0, custom_head:NoneType=None
):

A sequential container.

Example::

# Using Sequential to create a small model. When `model` is run,
# input will first be passed to `Conv2d(1,20,5)`. The output of
# `Conv2d(1,20,5)` will be used as the input to the first
# `ReLU`; the output of the first `ReLU` will become the input
# for `Conv2d(20,64,5)`. Finally, the output of
# `Conv2d(20,64,5)` will be used as input to the second `ReLU`
model = nn.Sequential(
    nn.Conv2d(1, 20, 5), nn.ReLU(), nn.Conv2d(20, 64, 5), nn.ReLU()
)

# Using Sequential with OrderedDict. This is functionally the
# same as the above code
model = nn.Sequential(
    OrderedDict(
        [
            ("conv1", nn.Conv2d(1, 20, 5)),
            ("relu1", nn.ReLU()),
            ("conv2", nn.Conv2d(20, 64, 5)),
            ("relu2", nn.ReLU()),
        ]
    )
)

source

RNN_FCNPlus


def RNN_FCNPlus(
    c_in, c_out, seq_len:NoneType=None, d:NoneType=None, hidden_size:int=100, rnn_layers:int=1, bias:bool=True,
    cell_dropout:int=0, rnn_dropout:float=0.8, bidirectional:bool=False, shuffle:bool=True, fc_dropout:float=0.0,
    use_bn:bool=False, conv_layers:list=[128, 256, 128], kss:list=[7, 5, 3], se:int=0, custom_head:NoneType=None
):

A sequential container.

Example::

# Using Sequential to create a small model. When `model` is run,
# input will first be passed to `Conv2d(1,20,5)`. The output of
# `Conv2d(1,20,5)` will be used as the input to the first
# `ReLU`; the output of the first `ReLU` will become the input
# for `Conv2d(20,64,5)`. Finally, the output of
# `Conv2d(20,64,5)` will be used as input to the second `ReLU`
model = nn.Sequential(
    nn.Conv2d(1, 20, 5), nn.ReLU(), nn.Conv2d(20, 64, 5), nn.ReLU()
)

# Using Sequential with OrderedDict. This is functionally the
# same as the above code
model = nn.Sequential(
    OrderedDict(
        [
            ("conv1", nn.Conv2d(1, 20, 5)),
            ("relu1", nn.ReLU()),
            ("conv2", nn.Conv2d(20, 64, 5)),
            ("relu2", nn.ReLU()),
        ]
    )
)

from tsai.models.utils import count_parameters
from tsai.models.RNN_FCN import *

bs = 16
n_vars = 3
seq_len = 12
c_out = 2
xb = torch.rand(bs, n_vars, seq_len)
test_eq(RNN_FCNPlus(n_vars, c_out, seq_len)(xb).shape, [bs, c_out])
test_eq(LSTM_FCNPlus(n_vars, c_out, seq_len)(xb).shape, [bs, c_out])
test_eq(MLSTM_FCNPlus(n_vars, c_out, seq_len)(xb).shape, [bs, c_out])
test_eq(GRU_FCNPlus(n_vars, c_out, shuffle=False)(xb).shape, [bs, c_out])
test_eq(GRU_FCNPlus(n_vars, c_out, seq_len, shuffle=False)(xb).shape, [bs, c_out])
test_eq(count_parameters(LSTM_FCNPlus(n_vars, c_out, seq_len)), count_parameters(LSTM_FCN(n_vars, c_out, seq_len)))

bs = 16
n_vars = 3
seq_len = 12
c_out = 2
xb = torch.rand(bs, n_vars, seq_len)
custom_head = nn.Linear(228, c_out)
test_eq(RNN_FCNPlus(n_vars, c_out, seq_len, custom_head=custom_head)(xb).shape, [bs, c_out])

bs = 16
n_vars = 3
seq_len = 12
d = 10
c_out = 2
xb = torch.rand(bs, n_vars, seq_len)
test_eq(RNN_FCNPlus(n_vars, c_out, seq_len, d=d)(xb).shape, [bs, d, c_out])

bs = 16
n_vars = 3
seq_len = 12
d = (5, 3)
c_out = 2
xb = torch.rand(bs, n_vars, seq_len)
test_eq(RNN_FCNPlus(n_vars, c_out, seq_len, d=d)(xb).shape, [bs, *d, c_out])

LSTM_FCNPlus(n_vars, seq_len, c_out, se=8)

LSTM_FCNPlus(
  (backbone): _RNN_FCN_Base_Backbone(
    (rnn): LSTM(2, 100, batch_first=True)
    (rnn_dropout): Dropout(p=0.8, inplace=False)
    (convblock1): ConvBlock(
      (0): Conv1d(3, 128, kernel_size=(7,), stride=(1,), padding=(3,), bias=False)
      (1): BatchNorm1d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
      (2): ReLU()
    )
    (se1): SqueezeExciteBlock(
      (avg_pool): GAP1d(
        (gap): AdaptiveAvgPool1d(output_size=1)
        (flatten): Reshape(bs)
      )
      (fc): Sequential(
        (0): Linear(in_features=128, out_features=16, bias=False)
        (1): ReLU()
        (2): Linear(in_features=16, out_features=128, bias=False)
        (3): Sigmoid()
      )
    )
    (convblock2): ConvBlock(
      (0): Conv1d(128, 256, kernel_size=(5,), stride=(1,), padding=(2,), bias=False)
      (1): BatchNorm1d(256, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
      (2): ReLU()
    )
    (se2): SqueezeExciteBlock(
      (avg_pool): GAP1d(
        (gap): AdaptiveAvgPool1d(output_size=1)
        (flatten): Reshape(bs)
      )
      (fc): Sequential(
        (0): Linear(in_features=256, out_features=32, bias=False)
        (1): ReLU()
        (2): Linear(in_features=32, out_features=256, bias=False)
        (3): Sigmoid()
      )
    )
    (convblock3): ConvBlock(
      (0): Conv1d(256, 128, kernel_size=(3,), stride=(1,), padding=(1,), bias=False)
      (1): BatchNorm1d(128, eps=1e-05, momentum=0.1, affine=True, track_running_stats=True)
      (2): ReLU()
    )
    (gap): GAP1d(
      (gap): AdaptiveAvgPool1d(output_size=1)
      (flatten): Reshape(bs)
    )
    (concat): Concat(dim=1)
  )
  (head): Sequential(
    (0): Linear(in_features=228, out_features=12, bias=True)
  )
)